# Copyright © 1996-2007 SRI International, Marine Biological Laboratory, DoubleTwist Inc., The Institute for Genomic Research, J. Craig Venter Institute, University of California at San Diego, and UNAM. All Rights Reserved. # # # Please see the license agreement regarding the use of and distribution of this file. # The format of this file is defined at http://bioinformatics.ai.sri.com/ptools/flatfile-format.html . # # Species: E. coli K-12 # Database: EcoCyc # Version: 11.5 # File Name: reactions.dat # Date and time generated: August 6, 2007, 17:31:42 # # Attributes: # UNIQUE-ID # TYPES # COMMON-NAME # ACTIVATORS # BALANCE-STATE # BASAL-TRANSCRIPTION-VALUE # CITATIONS # COMMENT # CREDITS # DATA-SOURCE # DBLINKS # DELTAG0 # DEPRESSORS # EC-NUMBER # ENZYMATIC-REACTION # ENZYMES-NOT-USED # EQUILIBRIUM-CONSTANT # IN-PATHWAY # INHIBITORS # INSTANCE-NAME-TEMPLATE # LEFT # MEMBER-SORT-FN # MOVED-IN # MOVED-OUT # OFFICIAL-EC? # ORPHAN? # PREDECESSORS # PRIMARIES # REACTANTS # REACTION-LIST # REGULATED-BY # REQUIREMENTS # RIGHT # SIGNAL # SPECIES # SPONTANEOUS? # STD-REDUCTION-POTENTIAL # STIMULATORS # SYNONYMS # UNIQUE-ID - RXN0-4701 TYPES - Small-Molecule-Reactions COMMENT - This reaction is the exoribonucleolytic cleavage of purine ribonucleotides. ENZYMATIC-REACTION - ENZRXN0-5961 // UNIQUE-ID - RXN0-3543 TYPES - Small-Molecule-Reactions ENZYMATIC-REACTION - ENZRXN0-4983 ENZYMATIC-REACTION - ENZRXN0-4982 LEFT - AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP RIGHT - AMINO-HYDROXYMETHYL-METHYL-PYR-P RIGHT - |Pi| // UNIQUE-ID - PGLYCEROLTRANSII-RXN TYPES - Small-Molecule-Reactions COMMENT - This reaction transfers phosphoglycerol residues between MDO /molecules. ENZYMATIC-REACTION - PGLYCEROLTRANSII-ENZRXN LEFT - |MDO-6-Glycerophospho-D-Glucoses| LEFT - |MDO-D-Glucoses| RIGHT - |MDO-D-Glucoses| RIGHT - |MDO-6-Glycerophospho-D-Glucoses| // UNIQUE-ID - DSBBPROT-RXN TYPES - Small-Molecule-Reactions COMMENT - This reaction reoxidizes the disulfide bond of a disulfide /oxidoreductase. ENZYMATIC-REACTION - DSBBPROT-ENZRXN // UNIQUE-ID - UBIQUINOL-OX-RXN TYPES - Protein-Reactions IN-PATHWAY - ELECTRON-TRANSPORT-2 LEFT - |Red-Ubiquinol-8-Oxidoreductases| LEFT - |Cytochromes-B| RIGHT - |Ox-Ubiquinone-8-Oxidoreductases| RIGHT - |Cytochromes-B-Reduced| SPECIES - Escherichia coli K-12 // UNIQUE-ID - TRANS-2-DECENOYL-ACP-ISOM-RXN TYPES - Protein-Reactions BALANCE-STATE - :BALANCED COMMENT - Isomerization of products of dehydration. One leads to /unsaturated fatty acids, the other to saturated fatty acids. ENZYMATIC-REACTION - TRANS-2-DECENOYL-ACP-ISOM-ENZRXN IN-PATHWAY - PWY0-862 LEFT - TRANS-D2-DECENOYL-ACP RIGHT - CIS-DELTA3-DECENOYL-ACP // UNIQUE-ID - TORSASP-RXN TYPES - Protein-Reactions CITATIONS - [95214091] CITATIONS - [93128858] CITATIONS - [90206041] CITATIONS - [93272330] COMMENT - In this reaction the sensor kinase-phosphotransferase TorS undergoes /intermolecular transphosphorylation. The phosphoryl group is transferred from /the histidine residue H443 to aspartate residue Asp723. COMMENT - Sensor kinase-phosphotransferase TorS is unusual in that in addition to the /conserved transmitter domain, it also contains a receiver and C-terminal /alternative transmitter domain. The autophosphorylation site, histidine residue /H443 of the conserved transmitter domain, transfers the phosphoryl group to the /receiver phosphorylation site, aspartate D723. This is achieved through /intermolecular phosphorylation between identical multimers of the complex. /|CITS: [97280783] [96405651] [21172890]| IN-PATHWAY - TOR-PWY LEFT - PHOSPHO-TORS RIGHT - PHOSPHO-TORASP SPECIES - Escherichia coli K-12 // UNIQUE-ID - TORS850-RXN TYPES - Protein-Reactions CITATIONS - [95214091] CITATIONS - [93128858] CITATIONS - [90206041] CITATIONS - [93272330] COMMENT - In this reaction the sensor kinase-phosphotransferase TorS undergoes /intermolecular transphosphorylation. The phosphoryl group is transferred /from the aspartate residue to the histidine 850 residue. COMMENT - Sensor kinase-phosphotransferase TorS is unusual in that in addition to the /conserved transmitter domain, it also contains a receiver and a C-terminal /alternative transmitter domain. The receiver phosphorylation site, aspartate /D723, transfers the phosphoryl group to the alternative transmitter /phosphorylation site, histidine H850. This is achieved through intermolecular /phosphorylation between identical multimers of the complex. The H850 /phosphorylation site is the phosphodonor site for the TorR response regulator. /|CITS: [97280783] [96405651]| IN-PATHWAY - TOR-PWY LEFT - PHOSPHO-TORASP RIGHT - PHOSPHO-TORS850 SPECIES - Escherichia coli K-12 // UNIQUE-ID - RXN0-947 TYPES - Protein-Reactions CITATIONS - [12591875] ENZYMATIC-REACTION - ENZRXN0-1084 IN-PATHWAY - PWY0-501 LEFT - OCTANOYL-ACP LEFT - |Non-lipoylated-domains| RIGHT - |Octanoylated-domains| RIGHT - ACP // UNIQUE-ID - RXN0-1137 TYPES - Protein-Reactions ENZYMATIC-REACTION - ENZRXN0-1310 LEFT - |E2(O)-MONOMER| LEFT - LIPOYL-ACP RIGHT - SUCB-LIPOATE RIGHT - ACP //